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1 October 2003 Generalized models vs. classification tree analysis: Predicting spatial distributions of plant species at different scales
Wilfried Thuiller, Miguel B. Araújo, Sandra Lavorel
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Abstract

Statistical models of the realized niche of species are increasingly used, but systematic comparisons of alternative methods are still limited. In particular, only few studies have explored the effect of scale in model outputs. In this paper, we investigate the predictive ability of three statistical methods (generalized linear models, generalized additive models and classification tree analysis) using species distribution data at three scales: fine (Catalonia), intermediate (Portugal) and coarse (Europe). Four Mediterranean tree species were modelled for comparison. Variables selected by models were relatively consistent across scales and the predictive accuracy of models varied only slightly. However, there were slight differences in the performance of methods. Classification tree analysis had a lower accuracy than the generalized methods, especially at finer scales. The performance of generalized linear models also increased with scale. At the fine scale GLM with linear terms showed better accuracy than GLM with quadratic and polynomial terms. This is probably because distributions at finer scales represent a linear sub-sample of entire realized niches of species. In contrast to GLM, the performance of GAM was constant across scales being more data-oriented. The predictive accuracy of GAM was always at least equal to other techniques, suggesting that this modelling approach is more robust to variations of scale because it can deal with any response shape.

Abbreviations: GLM = Generalized Linear Model; GAM = Generalized Additive Model; CTA = Classification Tree Analysis; ROC curve = Receiver Operating Characteristic curve; AUC = Area Under the Curve.

Wilfried Thuiller, Miguel B. Araújo, and Sandra Lavorel "Generalized models vs. classification tree analysis: Predicting spatial distributions of plant species at different scales," Journal of Vegetation Science 14(5), 669-680, (1 October 2003). https://doi.org/10.1658/1100-9233(2003)014[0669:GMVCTA]2.0.CO;2
Received: 11 April 2002; Accepted: 13 February 2003; Published: 1 October 2003
JOURNAL ARTICLE
12 PAGES

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KEYWORDS
accuracy assessment
Climate variable
generalized additive model
Generalized linear model
Mediterranean tree species
Receiver operating characteristics curve
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