Lake Waiau is a tropical alpine lake situated near the summit of Mauna Kea on the Island of Hawai‘i at an elevation of 3969 m. The lake is a place of Hawaiian cultural practice that encompasses Hawaiian mythology, history, genealogy, and spirituality. Concern over declining lake levels has created the stimulus to examine methodologies to monitor lake levels without disturbance. The objective of this research study was to determine the most accurate and cost-effective combination of new approaches to enable long-term monitoring with minimal disturbance to the lake and its environs. Three strategies were used to construct 3D models of the lake: soft-copy stereo photogrammetry from aerial photography, image-based 3D reconstruction from overlapping photographs (Structure from Motion), and terrestrial laser scanning (TLS). To supplement these detection methods, side scan sonar was used to collect bathymetric data. The results were three high-resolution 3D models that were used to calculate volumetric and areal changes over time using Geographic Information Systems (GIS) to analyze and visualize the lake body. The methodologies used in this study are compared for the feasibility of long-term data collection based on variations in accuracy and the associated costs of data collection.