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1 November 2012 Multilocus phylogeny of arvicoline voles (Arvicolini, Rodentia) shows small tree terrace size
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Abstract

We combined mitochondrial (cyb, control region, coi, nd4) and nuclear (irbp, ghr, sry, lcat) DNA sequence data to infer phylogenetic relationships of arvicoline voles. The concatenated supermatrix contained 72.8 % of missing data. From this dataset, Bayesian inference showed close relationships of Arvicola and Chionomys, Proedromys with Lasiopodomys and Microtus gregalis, Phaiomys with Neodon and M. clarkei. Genus Microtus formed a supported group with Blanfordimys and N. juldaschi. The gene partition taxon sets were explained in the multilocus phylogeny in such a way that the resulting Bayesian inference tree represented a unique solution on a terrace in the tree space. This means that although the supermatrix contained a large proportion of missing data, it was informative in retrieving a phylogeny with a unique optimality score, tree likelihood.

Natália Martínková and Jiří Moravec "Multilocus phylogeny of arvicoline voles (Arvicolini, Rodentia) shows small tree terrace size," Folia Zoologica 61(3–4), 254-267, (1 November 2012). https://doi.org/10.25225/fozo.v61.i3.a10.2012
Received: 4 January 2012; Accepted: 25 June 2012; Published: 1 November 2012
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