The presence of a snowpack, which may last up to 9 months in the Arctic, can provide insulation from the cold winter temperature for small mammals living beneath it, such as lemmings. Since lemmings have to move through the snowpack during that period, it is important to better understand how the physical properties of snow affect the way they dig tunnels. Here, we tested 1) whether lemmings systematically dig in the snowpack at the ground level where they can find their food plants, and 2) whether they choose the softest snow layer in which to dig, which is usually the depth hoar layer in the arctic snowpack. We found 33 lemming tunnels in 2017 and 2018 by digging through the snow at the sites of arctic fox attacks on lemmings. Contrary to our expectation, almost all the tunnels (32/33) were found to be higher than ground level, probably because of the presence of obstacles (i.e., melt-freeze crusts or hummocks) at the base of the snowpack. As predicted, all tunnels were dug in the soft depth hoar layer, which had a lower density than snow layers below and above it. Lemmings also showed a preference to dig their tunnels at the top of the depth hoar, just below a hard snow layer. Systematically digging their tunnels in the lowest-density snow layer, regardless of its height in the snow pack, could be a strategy for lemmings to minimize energy expenditure, which could improve their survival and chances of reproducing in winter.

Distress calls are signals given by individuals experiencing physical stress such as handling by a predator. These calls have been recorded in numerous phylogenetically distant vertebrate species, and share certain acoustic features, such as high amplitude, broadband, and rich harmonic structure. Screaming hairy armadillos (Chaetophractus vellerosus) sometimes give a high-amplitude weeping call when captured by predators or disturbed by humans. We provide an acoustic characterization of this call using recordings of hand-held wild individuals, and test whether it constitutes a distress signal. The weeping call was a harsh, loud, broadband, long sound, composed of five note types: crying, inhaled, inhaled sobbing, exhaled sobbing, and grunt notes. Crying notes were the most common, distinctive, and loudest sounds. The proportion of armadillos that called when disturbed was between nearly five to seven times higher than when treated with care. Likewise, 223 hunters reported armadillos consistently weeping when trapped by dogs, and no weeping was heard in natural undisturbed conditions. Our data support a distress signal role for the weeping call.

In mammalian species where infanticide by males is likely, females exhibit counterstrategies to prevent or mitigate the costs of infanticide. One putative mitigation strategy is the “Bruce effect,” in which pregnant or inseminated females exposed to an unfamiliar male experience pregnancy block or failure. Females then mate with the new male, thus shifting investment from a “doomed” pregnancy to a more fruitful one. However, the Bruce effect may be an adaptive response to other factors besides infanticide. For example, if paternal care is necessary for offspring survival, and an unfamiliar male replacing the original mate is unlikely to provide such care to offspring of a litter it did not sire, then a female may terminate a pregnancy to initiate a new one. The infanticide and paternal care hypotheses have not been rigorously tested because comparative data on the Bruce effect across mammals are scarce. We compiled data on the Bruce effect, infanticide, and paternal care from one particularly rich source of information, rodents, but found the data set to be less rich than expected. The Bruce effect, infanticide, and paternal care were common among rodent species, but we found no clear relationship among the traits. However, this was likely due to 1) a bias toward positive results, 2) missing data, and 3) a reliance on studies of captive animals. These are common problems in comparative research, and we outline standards that should be implemented to successfully answer questions of importance in the field.

Long-term datasets are becoming increasingly important for assessing population- and species-level responses to a changing environment. Programs that record morphological measurements of horns, antlers, and pronghorns were established in the early- to mid-20th century to collect biological information about animals that possess large horns, antlers, or pronghorns, which could be used to assess the effectiveness of conservation efforts for large mammals in North America. The general relevance of record books has been questioned because of the minimum size requirements for inclusion in a record book, which may mask trends when changes in the population occur. We compared trends in size of antlers, horns, and pronghorns through time using records from three records programs with different minimum size requirements to evaluate the influence of entry requirements on temporal trends. We also investigated whether horn, antler, or pronghorn size affected the probability of specimens being submitted to a records program. Only two of 17 categories exhibited less-pronounced trends in the record book with the highest size requirements for entry, and in two categories trends were more pronounced. Although societal interest in submitting eligible specimens increased slightly over time in one of six categories, the probability of voluntary entry was largely random and not affected by year of harvest or size of specimen. In contrast to previous criticisms, trends in record books should not be expected to represent the size of all males within a population. Instead, our evaluation indicates that the records programs we examined can provide a useful resource for assessing long-term changes in phenotypic characteristics of ungulates, but importantly, they represent the respective range of sizes within which each program collects data.

Mothers should balance the risk and reward of allocating resources to offspring to optimize the reproductive value of both offspring and mother while maximizing lifetime reproductive success by producing high-quality litters. The reproductive restraint hypothesis suggests maternal allocation should peak for prime-aged mothers and be less for younger mothers such that body condition is not diminished to a level that would jeopardize their survival or future reproductive events. We assessed if reproductive tactics varied by maternal body mass and parity status in captive female white-tailed deer (Odocoileus virginianus) to determine if prime-aged mothers allocate relatively more resources to reproduction than primiparous mothers. Maternal body mass, not parity status, positively affected maternal allocation, with heavier mothers producing both heavy litters and heavy individual offspring. Conversely, maternal body mass alone did not affect litter size, rather the interaction between maternal body mass and parity status positively affected litter size such that maternal body mass displayed a greater effect on litter size for primiparous than multiparous mothers. Our results suggest that heavy white-tailed deer mothers allocate additional resources to current year reproduction, which may be an adaptation allowing mothers to produce high-quality litters and increase their annual reproductive success because survival to the next reproductive attempt is not certain.

Variation in core body temperature of mammals is a result of endogenous regulation of heat from metabolism and the environment, which is affected by body size and life history. We studied moose (Alces alces) in Alaska to examine the effects of endogenous and exogenous factors on core body temperature at seasonal and daily time scales. We used a modified vaginal implant transmitter to record core body temperature in adult female moose at 5-min intervals for up to 1 year. Core body temperature in moose showed a seasonal fluctuation, with a greater daily mean core body temperature during the summer (38.2°C, 95% CI = 38.1–38.3°C) than during the winter (37.7°C, 95% CI = 37.6–37.8°C). Daily change in core body temperature was greater in summer (0.92°C, 95% CI = 0.87–0.97°C) than in winter (0.58°C, 95% CI = 0.53–0.63°C). During winter, core body temperature was lower and more variable as body fat decreased among female moose. Ambient temperature and vapor pressure accounted for a large amount of the residual variation (0.06–0.09°C) in core body temperature after accounting for variation attributed to season and individual. Ambient temperature and solar radiation had the greatest effect on the residual variation (0.17–0.20°C) of daily change in core body temperature. Our study suggests that body temperature of adult female moose is influenced by body reserves within seasons and by environmental conditions within days. When studying northern cervids, the influence of season and body condition on daily patterns of body temperature should be considered when evaluating thermal stress.

Foraging behavior underpins many ecological processes; however, robust assessments of this behavior for free-ranging animals are rare due to limitations to direct observations. We leveraged acoustic monitoring and GPS tracking to assess the factors influencing foraging behavior of mule deer (Odocoileus hemionus). We deployed custom-built acoustic collars with GPS radiocollars on mule deer to measure location-specific foraging. We quantified individual bites and steps taken by deer, and quantified two metrics of foraging behavior: the number of bites taken per step and the number of bites taken per unit time, which relate to foraging intensity and efficiency. We fit statistical models to these metrics to examine the individual, environmental, and anthropogenic factors influencing foraging. Deer in poorer body condition took more bites per step and per minute and foraged for longer irrespective of landscape properties. Other patterns varied seasonally with major changes in deer condition. In December, when deer were in better condition, they took fewer bites per step and more bites per minute. Deer also foraged more intensely and efficiently in areas of greater forage availability and greater movement costs. During March, when deer were in poorer condition, foraging was not influenced by landscape features. Anthropogenic factors weakly structured foraging behavior in December with no relationship in March. Most research on animal foraging is interpreted under the framework of optimal foraging theory. Departures from predictions developed under this framework provide insight to unrecognized factors influencing the evolution of foraging. Our results only conformed to our predictions when deer were in better condition and ecological conditions were declining, suggesting foraging strategies were state-dependent. These results advance our understanding of foraging patterns in wild animals and highlight novel observational approaches for studying animal behavior.

Human-caused habitat disturbances and climate change are leading threats to biodiversity. Studying the impacts of human activities on wildlife from a behavioral perspective is a relevant starting point to understand the mechanisms underlying population and species resistance and resilience to disturbances. In this study, we assessed the effects of weather (temperature and precipitation), habitat disturbances (roads and clearcuts), and natural habitat types on the space use patterns of a threatened boreal population of woodland caribou (Rangifer tarandus caribou). An extensive data set of 288,665 relocations from 50 adult females outfitted with GPS collars over 7 years in the boreal forest of Québec, Canada was used to evaluate residency time in natural and disturbed habitats for five distinct biologically defined periods. The most parsimonious linear mixed-effects model for each period showed that individuals stayed longer in more natural habitat types. During calving and summer, residency time decreased with increasing road density, whereas residency time decreased with increasing temperature during winter and spring. We found no evidence of a synergistic effect between daily weather and human disturbances on movement behavior of caribou, but consider their respective influence as additive. We also showed large individual variation in residency time, except during the calving period. Lower individual variation in residency time during calving may be explained by strong evolutionary constraints on behavior faced by females to ensure protection and survival of their offspring. Based on our results, we suggest keeping large patches of suitable and roadless habitat for caribou to favor the spacing-out antipredator strategy exhibited by females during calving. By tracking individuals over several complete annual cycles, we showed variation in the effects of daily weather and human disturbances on residency time across biological periods. Our study highlights that the inclusion of daily weather variables helps better understand space-use patterns of a threatened species.

The endangered Indiana bat (Myotis sodalis) congregates in large hibernation groups in winter and travels after spring emergence to form summer maternity colonies, but information on migration behavior in this species remains limited to mostly band recovery observations. We tracked female Indiana bats in spring migration toward summer grounds using aerial radiotelemetry. Adult female Indiana bats were radiotagged in spring from 2009 through 2017, with 15 individuals successfully tracked to summer grounds and an additional 11 bats located in summer grounds via aerial telemetry after migration was complete. This resulted in the location of 17 previously unknown summer grounds for female Indiana bats, including adding Georgia, Alabama, and Mississippi to the summer maternity range. Two of the colonies identified in this study were south of the previously known southernmost colony in Tennessee, expanding the summer maternity range for the species by 178 km. Time-stamped location fixes along the migration path provided information about nightly and overall distances traveled, duration of travel, migration speed, and weather-related influences on bat behavior. Bats traveled 164.6 ± 26.2 km (± SE) on average from hibernacula to summer grounds and were migrating for an average of 7.3 ± 1.4 calendar nights. Bats alternated between foraging and traveling throughout each night of their migration route. Nightly migration rate was 9.9 ± 0.8 km/h and bats were active on the landscape for an average of 6.1 ± 0.4 h/night. Lower nighttime temperatures and lower barometric pressure correlated with use of layover areas during a migration night. Understanding bat behavior during migration can provide pertinent information for land managers to consider in efforts to conserve potential migration corridors, foraging areas, and roosting habitats of species in decline.

We tested whether white-footed mice (Peromyscus leucopus) modulate the activity of three key intestinal digestive enzymes (maltase, sucrase, and aminopeptidase-N [APN]) based on diet composition. To test the adaptive modulation hypothesis (AMH), we fed mice either of three kinds of synthetic diet, high starch (HS, 50% carbohydrate), high protein (HP, 60% protein), and high lipid (HL, 25% lipid), and determined their digestive responses. First, there was no effect of either diet itself, or time eating the diet, on body mass, or mass and length of small intestine. Second, the activity of both disaccharidases summed over the entire small intestine was highest on the HS diet, which was higher than on the HP diet by about 45% and higher than on the HL diet by 400%. This was consistent with our prediction that starch induces disaccharidase activity, and demonstrated induction of disaccharidase activities by high dietary carbohydrate in a wild mammal. Third, both summed and mass-specific activity of maltase and sucrase of HL mice were lower than those of HP mice, even though their diets had the same content of starch, which suggests that lipid in the HL diet inhibited disaccharidase activity. Finally, the summed activity of APN was highest on the HP diet, which was higher than on the HS diet or HL diet by ~100%, consistent with our prediction that high protein content induces peptidase activity. Taken together, our results support the AMH, though they also illustrate that high lipid content in the diet can confound some predicted patterns. Flexibility of digestive enzyme activity is likely important in allowing white-footed mice to cope with fluctuations in the environmental availability of different food types.

Anthropogenic foods are utilized by many animals around the world, and these resources could impact dietary preferences and intra- and interspecific interactions. Under a quasi-Before-After-Control-Impact experimental design, we assessed how dingoes (Canis dingo) responded to a decline in anthropogenic foods in the Tanami Desert, central Australia. We did so by assessing dingo diets close to and away from human influence during a period when food waste was available at two rubbish tips, and then during a period when food waste was restricted at one of the tips. Our results demonstrate that access to anthropogenic foods can alter a top predator's diet. Namely, dingoes showed a preference for eating the desert mouse (Pseudomys desertor) in areas where food waste was restricted, whereas dingo diets did not reflect ambient prey availability at areas where food waste was constantly available. Reduced availability of food waste also affected interactions between dingoes, with cannibalism decreasing where food waste was removed, and it may have increased consumption of a subordinate mesopredator, the feral cat (Felis catus). By implication, efforts to manage food waste could reestablish or strengthen interactions between predators and their wild prey with possible cascading consequences for ecosystems.

Movement ecology and dispersal capabilities inherently drive genetic structure across landscapes. Through understanding dispersal and gene flow of giant kangaroo rats (Dipodomys ingens), conservation efforts can be focused, and we can further understand how genetic structure persists in this highly endemic small mammal. Here, we genetically identify parent–offspring and sibship relationships among 239 giant kangaroo rats using 15 microsatellites in the northern part of the species range and describe the individual genetic-spatial variation using a Moran eigenvector map (MEM). We further employ two landscape genetic analyses (isolation by resistance [IBR] and least cost paths [LCPs]) and two individual-based genetic metrics (Dps and a codominant marker distance from GenAlEx) to determine landscape factors (precipitation, slope, vegetation community, and roads) that influence gene flow. We found 19 pairs of related individuals, of which 18 were less than 250 m apart, but one sibling pair was 5.52 km apart, suggesting greater dispersal capabilities than previously noted. We found hierarchal spatial genetic structure using a MEM, with 3–4 genetically similar regions and two genetically similar subregions. Finally, we found low correlative strength between landscape features and gene flow. IBR consistently outperformed LCPs, and there was evidence that regions with 250–350 mm of precipitation and slope ≤ 5° promoted connectivity. We recommend that managers focus on habitat protection rather than corridor maintenance, with the caveat that anthropogenic factors were minimally considered in this study.

We examined geographic patterns of diversification in the highly impacted San Joaquin kangaroo rat, Dipodomys nitratoides, throughout its range in the San Joaquin Valley and adjacent basins in central California. The currently recognized subspecies were distinct by the original set of mensural and color variables used in their formal diagnoses, although the Fresno kangaroo rat (D. n. exilis) is the most strongly differentiated with sharp steps in character clines relative to the adjacent Tipton (D. n. nitratoides) and short-nosed (D. n. brevinasus) races. The latter two grade more smoothly into one another but still exhibit independent, and different, character clines within themselves. At the molecular level, as delineated by mtDNA cytochrome b sequences, most population samples retain high levels of diversity despite significant retraction in the species range and severe fragmentation of local populations in recent decades due primarily to landscape conversion for agriculture and secondarily to increased urbanization. Haplotype apportionment bears no relationship to morphologically defined subspecies boundaries. Rather, a haplotype network is shallow, most haplotypes are single-step variants, and the time to coalescence is substantially more recent than the time of species split between D. nitratoides and its sister taxon, D. merriami. The biogeographic history of the species within the San Joaquin Valley appears tied to mid-late Pleistocene expansion following significant drying of the valley resulting from the rain shadow produced by uplift of the Central Coastal Ranges.

We evaluated the fossil record of extinct and extant woodrats, and generated a comprehensive phylogenetic hypothesis of woodrat origins and relationships based on these data. The galushamyinin cricetines are redefined and reclassified as a subtribe of the Neotomini, including Repomys, Miotomodon, Galushamys, Nelsonia, and a new extinct genus with two new species. The geographic distribution of Nelsonia, restricted to montane coniferous forests of western Mexico, suggests that this subtribe was mostly confined to western coniferous ecosystems or similar ecosystems at lower elevation during glacial advances. A second subtribe of the Neotomini includes a new archaic genus and species, Neotoma, Hodomys, and Xenomys. Lindsaymys, a possible neotominin from the late Clarendonian (late Miocene) of California, demonstrates an occlusal morphology consistent with ancestry for the Neotomini, but the presence of a fourth root on M1 is problematic and may preclude the known populations from filling that role. Molars identified as Neotoma sp. from the Hemphillian (latest Miocene or early Pliocene) Rancho el Ocote assemblage of Guanajuato, Mexico, may represent the earliest Xenomys. Extant Neotoma species with a bilobed m3 appear to have originated subsequent to about 2.0 Ma, whereas Hodomys alleni and Xenomys nelsoni likely originated earlier from one or more extinct ancestors with an S-shaped m3.

Peromyscus melanophrys is a Mexican endemic distributed in seasonal tropical forests and semiarid lands. Molecular work based on mitochondrial and nuclear markers proposed the existence of four haplogroups within P. melanophrys. Peromyscus mekisturus (Puebla deer mouse) was included in one of these haplogroups. We tested the consistency between this hypothesis and external morphology, quantitative and qualitative cranial attributes, and ecological data for a sample of 1,155 specimens spanning the species distribution. We found ecological and morphological consistency with the phylogenetic pattern for P. melanophrys but not for P. mekisturus. We reassessed the taxonomic and nomenclatural status of the populations and type specimens formerly included in P. melanophrys. We concluded that these populations constitute four species: P. zamorae (Zamora deer mouse), distributed in the Mexican Plateau at elevations > 1,500 m; P. micropus (small-footed deer mouse), from lowland tropical deciduous forests of the San Pedro-Mezquital and Lerma-Santiago basins in western Mexico; P. melanophrys (black-eyed deer mouse) from lowland tropical deciduous forests of southeastern Mexico as far as eastern Oaxaca; and P. leucurus (Tehuantepec deer mouse), partially sympatric with P. melanophrys but reaching as far as Chiapas. Data on P. mekisturus were contradictory, and thus was kept as a valid species.

A taxonomic framework for South American cottontail rabbits (Lagomorpha: Leporidae: Sylvilagus) was recently published by Diersing and Wilson (2017). Although we agree with some of its taxonomic conclusions (e.g., species status for S. apollinaris and S. fulvescens), we disagree with others. We provide herein evidence supporting S. andinus as a valid species based on morphological characters and novel molecular data. We also provide details of the morphological characters of S. apollinaris and S. fulvescens that support separating these from S. brasiliensis. We adduce data suggestive to the effect that—absent any type material—S. defilippi is at best a nomen dubium. Finally, we provide evidence in support of recognizing additional Neotropical species of Sylvilagus.

Un esquema taxonómico para los conejos sudamericanos (Lagomorpha: Leporidae: Sylvilagus) fue recientemente publicado por Diersing y Wilson (2017). Aunque estamos de acuerdo con algunas de sus conclusiones (por ejemplo: estatus de especie válida para S. apollinaris y S. fulvescens), no estamos de acuerdo con las restantes conclusiones taxonómicas. Aportamos aquí pruebas convincentes sobre la característica naturaleza de los caracteres morfológicos y moleculares de S. andinus, pruebas que esgrimimos en apoyo de la hipótesis que esta última es una especie válida, así confirmando su escisión de S. brasiliensis. Proporcionamos detalles de los caracteres morfológicos de S. apollinaris y S. fulvescens que confirman la decisión taxonómica de asimismo separarlos de S. brasiliensis. Proporcionamos datos en aditamento que indican que a falta de cualquier material tipo para S. defilippi, este nombre es en el mejor de los casos un nomen dubium. Finalmente, ofrecemos datos y evidencia apoyando nuestras decisiones de reconocer un mayor número de especies Neotropicales de Sylvilagus que previamente se conocían.

Knowledge of how a species is divided into different genetic units, and the structure among these units, is fundamental to the protection of biodiversity. Procyonidae was one of the families in the Order Carnivora with more success in the colonization of South America. The most divergent species in this family is the kinkajou (Potos flavus). However, knowledge of the genetics and evolution of this species is scarce. We analyzed five mitochondrial genes within 129 individuals of P. flavus from seven Neotropical countries (Mexico, Guatemala, Honduras, Colombia, Ecuador, Peru, and Bolivia). We detected eight different populations or haplogroups, although only three had highly significant bootstrap values (southern Mexico and Central America; northern Peruvian, Ecuadorian, and Colombian Amazon; and north-central Andes and the southern Amazon in Peru). Some analyses showed that the ancestor of the southern Mexico–Central America haplogroup was the first to appear. The youngest haplogroups were those at the most southern area analyzed in Peru and Bolivia. A “borrowed molecular clock” estimated the initial diversification to have occurred around 9.6 million years ago (MYA). All the spatial genetic analyses detected a very strong spatial structure with significant genetic patches (average diameter around 400–500 km) and a clinal isolation by distance among them. The overall sample and all of the haplogroups we detected had elevated levels of genetic diversity, which strongly indicates their long existence. A Bayesian Skyline Plot detected, for the overall sample and for the three most significant haplogroups, a decrease in the number of females within the last 30,000–50,000 years, with a strong decrease in the last 10,000–20,000 years. Our data supported an alignment of some but not all haplogroups with putative morphological subspecies. We have not discounted the possibility of a cryptic kinkajou species.

Three subspecies of fin whales (Balaenoptera physalus) are currently recognized, including the northern fin whale (B. p. physalus), the southern fin whale (B. p. quoyi), and the pygmy fin whale (B. p. patachonica). The Northern Hemisphere subspecies encompasses fin whales in both the North Atlantic and North Pacific oceans. A recent analysis of 154 mitogenome sequences of fin whales from these two ocean basins and the Southern Hemisphere suggested that the North Pacific and North Atlantic populations should be treated as different subspecies. Using these mitogenome sequences, in this study, we conduct analyses on a larger mtDNA control region data set, and on 23 single-nucleotide polymorphisms (SNPs) from 144 of the 154 samples in the mitogenome data set. Our results reveal that North Pacific and North Atlantic fin whales can be correctly assigned to their ocean basin with 99% accuracy. Results of the SNP analysis indicate a correct classification rate of 95%, very low rates of gene flow among ocean basins, and that distinct mitogenome matrilines in the North Pacific are interbreeding. These results indicate that North Pacific fin whales should be recognized as a separate subspecies, with the name B. p. velifera Cope in Scammon 1869 as the oldest available name.

Molecular assays of sex determination typically rely on qualitative evaluation of sex-linked markers, which can lead to uncertainty when results contradict morphological identifiers of sex. To investigate whether disagreement between phenotypic and genotypic assays of sex could be underpinned by variation in sex chromosome copy number, we developed a quantitative genetic method to determine sex that is broadly applicable to mammals with XY sex determination. We sequenced a region of the zinc-finger gene ZF, which has fixed genetic differences between the X and Y chromosomes, and screened 173 cetacean specimens for ZFX–ZFY haplotype identity and read depth. Using a subset of 90 male specimens, we demonstrate that haplotype read depth is an accurate estimator of chromosome copy number. We identified three specimens representing two different cetacean species that had external female morphological traits, Y chromosome haplotypes, and ratios of ZFX:ZFY haplotypes that were above the 1:1 value expected for genetic males. These results provide the first evidence of XXY aneuploidy in cetaceans. Investigation of the reproductive tract of one specimen, a True's beaked whale (Mesoplodon mirus), revealed an intersex phenotype; despite having external characteristics typically diagnostic for the female sex, a penis and testes were present. Our results suggest that intersex phenotypes may be associated with XXY aneuploidy, and that this phenomenon may be underestimated due to it not being detectable by qualitative assays for determining sex.

Specimens from natural history collections (NHCs) are increasingly being used for genetic studies and can provide information on extinct populations, facilitate comparisons of historical and contemporary populations, produce baseline data before environmental changes, and elucidate patterns of change. Destructive sampling for DNA may be in disagreement with NHC goals of long-term care and maintenance. Differentiating quality among sample sources can direct destructive sampling to the source predicted to yield the highest quality DNA and most reliable data, potentially reducing damage to specimens, laboratory costs, and genotyping errors. We used the kit fox (Vulpes macrotis) as a model species and evaluated the quality and reliability of genetic data obtained from carnivoran specimens via three different sample sources: cranial bones, nasal bones, and toepads. We quantified variation in microsatellite amplification success and genotyping error rates and assessed the reliability of source-specific genic data. Toepads had the highest amplification success rates and lowest genotyping error rates. Shorter loci had higher amplification success and lower allelic dropout rates than longer loci. There were substantial differences in the reliability of resulting multilocus genotypes. Toepads produced the most reliable data, required the fewest replicates, and therefore, had the lowest costs to achieve reliable data. Our results demonstrate that the quality of DNA obtained from specimens varies by sample source and can inform NHCs when evaluating requests for destructive sampling. Our results suggest that prior to large-scale specimen sampling, researchers should conduct pilot studies to differentiate among source-specific data reliability, identify high performing loci, reduce costs of analyses, and minimize destructive sampling.

The Systematic Collections Committee of the American Society of Mammalogists advises curators and other personnel affiliated with natural history collections in matters relating to administration, curation, and accreditation of mammal specimens and their associated data. The Systematic Collections Committee also maintains a list of curatorial standards for managing a collection-accreditation program under the auspices of the American Society of Mammalogists. To date, the Systematic Collections Committee has provided guidance for the more traditional specimen collections (skin, skeletal, fluid, etc.) and specimen data management. Given the rapidly expanding role of genetic resources in biological research, the Systematic Collections Committee herein presents a series of formal guidelines and standards designed to assist collections professionals in the current best practices for curation and maintenance of collections of genetic resources, to ensure long-term integrity of the archived material, and to address personnel safety and guidelines for researchers and curatorial staff. These guidelines and standards are intended to provide constructive guidance and a mechanism of accreditation for collections that vary in scale and infrastructure.