Anterograde and retrograde transport of horseradish peroxidase was used to examine the afferent and efferent projections of the glossopharyngeal and vagal nerves in the lamprey, Lampetra japonica. Except for the ganglion cells and motoneurons, the distribution patterns of HRP-positive elements differed little between the two nerves. Afferent fibers mainly terminated in the ipsilateral cerebellar area, medial octavolateralis nucleus, and between the ventral octavolateralis nucleus and descending tract and nucleus of the trigeminal nerve (dV). In the cerebellar area, most of the labeled fibers were located in the molecular zone, but some penetrated into the granular zone. In the rostral part of the medial octavolateralis nucleus, labeled fibers coursed from the middle to the lateral area, and in the caudal part, they were localized in the dorsal area of the nucleus. In the area between the dV and ventral octavolateralis nucleus, labeled fibers coursed near the dorsal margin of the rostral part of the dV, and in the caudal part, they shifted dorsally. Ganglion cells and motoneurons of each nerve were also labeled.