Open Access
How to translate text using browser tools
4 December 2019 Incongruence of morphological determinations and DNA barcode sequences: a case study in Cinnamomum (Lauraceae)
Jens G. Rohwer, Dimitrij Trofimov, Eike Mayland-Quellhorst, Dirk Albach
Author Affiliations +
Abstract

In the course of molecular systematic studies of Lauraceae we received a sample of a plant cultivated under the name Cinnamomum porrectum in the Botanical Garden München-Nymphenburg. Preliminary determinations, both morphologically based on the Flora of China (Li & al. 2008) and by chloroplast sequences (psbA-trnH spacer, trnK intron including matK gene, trnL intron, trnL-trnF spacer and trnQ-rps16 spacer) obtained by Sanger sequencing suggested that it was C. camphora, still the plant looked different from other individuals of C. camphora cultivated in the botanical gardens of Berlin, Hamburg, Mainz, Munich and Oldenburg. Attempts to sequence the more informative nuclear internal transcribed spacer repeatedly led to mixed signals. We therefore used Illumina sequencing on a set of pre-amplified molecular markers (ITS, trnK 3′ and 5′ intron, trnL intron, and the intergenic spacers psbA-trnH, trnL-trnF, as well as parts of the trnQ-rps16 spacer), and downloaded available sequences of C. camphora and C. parthenoxylon from GenBank for comparison. Considerable differences were found among these sequences, but the haplotype groups do not coincide with the current species determinations. Particularly the internal transcribed spacer sequences are rather diverse, suggesting possible misidentifications, contaminations, and/or a common gene pool that is larger than anticipated. Concerning the plant in question, our results suggest that it may be a hybrid, with C. camphora as the maternal and another species, possibly C. parthenoxylon, as the paternal parent.

Citation: Rohwer J. G., Trofimov D., Mayland-Quellhorst E. & Albach D. 2019: Incongruence of morphological determinations and DNA barcode sequences: a case study in Cinnamomum (Lauraceae). – Willdenowia 49: 383–400. doi:  https://doi.org/10.3372/wi.49.49309

Version of record first published online on 4 December 2019 ahead of inclusion in December 2019 issue.

© 2019 The Authors · This open-access article is distributed under the CC BY 4.0 licence
Jens G. Rohwer, Dimitrij Trofimov, Eike Mayland-Quellhorst, and Dirk Albach "Incongruence of morphological determinations and DNA barcode sequences: a case study in Cinnamomum (Lauraceae)," Willdenowia 49(3), 383-400, (4 December 2019). https://doi.org/10.3372/wi.49.49309
Received: 14 February 2019; Accepted: 18 September 2019; Published: 4 December 2019
KEYWORDS
Cinnamomum
interspecific hybridization
ITS
Lauraceae
matK
NGS
psbA-trnH spacer
Back to Top