Johnsongrass [Sorghum halepense (L.) Pers.] is one of the most noxious weeds distributed around the world. Due to its rapid growth, wide dissemination, seeds that can germinate after years in the soil, and ability to spread via rhizomes, S. halepense is difficult to control. From a perspective of plant pathology, S. halepense is also a potential reservoir of pathogens that can eventually jump to other crops, especially corn (Zea mays L.) and sorghum [Sorghum bicolor (L.) Moench]. As one of the most problematic weeds, S. halepense and its diseases can provide useful information concerning its role in diseases of agronomically important crops. An alternative consideration is that S. halepense may provide a source of genes for resistance to pathogens. While some studies have verified that pathogens isolated from S. halepense actually cause disease on host crops through cross inoculation, similarity of disease symptoms and pathogen morphology have been used for identity of the disease agent in most studies. Availability of DNA sequence information has greatly altered and improved pathogen identification, leading to significant changes in phylogenetic assignments. Reclassification of pathogens, especially fungi, raises new questions concerning the role of S. halepense as a disease reservoir. Our goals in this review are to pinpoint, where possible, diseases for which S. halepense acts as a significant pathogen reservoir and to point out problem areas where further research is needed.

Alligatorweed [Alternanthera philoxeroides (Mart.) Griseb.] is an invasive semiaquatic weed that poses a serious threat to agricultural production and ecological balance worldwide. However, information about genetic factors associated with the adaptation and invasion mechanisms of this species is limited. Screening for appropriate reference genes is important for gene expression and functional analysis research in A. philoxeroides. In this study, 30 candidate genes that showed stable expression in different A. philoxeroides tissues under various treatments in RNA-seq data were chosen to design quantitative real-time PCR (qRT-PCR) primers. After the amplification specificity validation, 25 candidates were selected and further evaluated in a diverse set of A. philoxeroides samples, including leaf, stem, and root tissues under drought, salinity, heat, chilling, five herbicides, and corresponding untreated controls using qRT-PCR. The delta-CT method, geNorm, NormFinder, BestKeeper, and RefFinder algorithms were used to identify stable reference genes from A. philoxeroides samples. Overall, CoA, RFI2, Tubby, SRP19, and V-ATPase were the top five ideal reference genes in all organs and conditions. Tubby and CoA were the most stable reference genes in the leaf/stem; and RFI2, ERprr, and SPR19 were suitable reference genes for the roots. This work provided a foundation for exploring gene expression profiling of A. philoxeroides, especially those adaptation- and invasion-related genes, which may help in management of this invasive weed.

Horseweed [Conyza canadensis (L.) Cronquist] is a facultative winter annual weed that can emerge from March to November in Michigan. Fall-emerging C. canadensis overwinters as a rosette, while spring-emerging C. canadensis skips the rosette stage and immediately grows upright upon emergence. In Michigan, primary emergence recently shifted from fall to spring/ summer and therefore from a rosette to an upright growth type. Growth chamber experiments were conducted to determine (1) whether both C. canadensis growth types could originate from a single parent and (2) whether common environmental cues can influence growth type. Variations in temperature, photoperiod, competition, shading, and soil moisture only resulted in the rosette growth type in four C. canadensis populations originating from seed collected from a single parent of the upright growth type. However, a vernalization period of 4 wk following water imbibition, but before germination, resulted in the upright growth type. Dose–response experiments were conducted to determine whether glyphosate sensitivity differed between C. canadensis growth types generated from a single parent of the upright growth type. Upright-type C. canadensis from known glyphosate-resistant populations ISB-18 and MSU-18 were 4- and 3-fold less sensitive to glyphosate than their rosette siblings, respectively. Interestingly, differences in glyphosate sensitivity were not observed between growth types from the susceptible population. These results suggest that while C. canadensis populations shift from winter to summer annual life cycles, concurrent increases in glyphosate resistance could occur.

Barnyardgrass [Echinochloa crus-galli (L.) P. Beauv.] is a noxious grass weed that infests rice fields and causes huge crop yield losses. In this study, we collected 12 E. crus-galli populations from rice fields of Ningxia Province in China and investigated the resistance levels to the acetolactate synthase (ALS) inhibitor penoxsulam and the acetyl-CoA carboxylase (ACCase) inhibitor cyhalofop-butyl. The results showed that eight populations exhibited resistance to penoxsulam and four populations evolved resistance to cyhalofop-butyl. Moreover, all four cyhalofop-butyl–resistant populations (NX3, NX4, NX6, and NX7) displayed multiple herbicide resistance to both penoxsulam and cyhalofop-butyl. The alternative herbicides bispyribac-sodium, metamifop, and fenoxaprop-p-ethyl cannot effectively control the multiple herbicide–resistant (MHR) plants. To characterize the molecular mechanisms of resistance, we amplified and sequenced the target site–encoding genes in resistant and susceptible populations. Partial sequences of three ALS genes and six ACCase genes were examined. A Trp-574-Leu mutation was detected in EcALS1 and EcALS3 in two high-level (65.84- and 59.30-fold) penoxsulam-resistant populations, NX2 and NX10, respectively. In addition, one copy (EcACC4) of ACCase genes encodes a truncated aberrant protein due to a frameshift mutation in E. crus-galli populations. None of the amino acid substitutions that are known to confer herbicide resistance were detected in ALS and ACCase genes of MHR populations. Our study reveals the wide spread of MHR E. crus-galli populations in Ningxia Province that exhibit resistance to several ALS and ACCase inhibitors. Non–target site based mechanisms are likely to be involved in E. crus-galli resistance to the herbicides, at least in four MHR populations.

Flixweed [Descurainia sophia (L.) Webb ex Prantl] is a notorious broadleaf weed that is widely distributed in winter wheat–growing areas of China and has evolved resistance to tribenuron-methyl mainly due to target-site resistance (TSR) mutations in acetolactate synthase (ALS). In the current research, two ALS genes were identified in tribenuron-methyl–susceptible (TS) or tribenuron-methyl–resistant (TR) D. sophia. Resistance mutations of Asp-376-Glu and Pro-197-Ala were identified on ALS1 and ALS2 isozymes in TR D. sophia, respectively. The TR D. sophia evolved 10,836.3-fold resistance to tribenuron-methyl and displayed cross-resistance to multiple ALS-inhibiting herbicides with different chemical structures. Dose response experiments and ALS activity assay indicated that two mutated ALS isozymes contributed differentially in resistance to tribenuron-methyl, flucetosulfuron, and pyribenzoxim. In addition, the relative expression level of the ALS1 gene was 2.2- and 1.6-fold higher than ALS2 genes in TR D. sophia at 1 and 7 d after tribenuron-methyl treatment, respectively. In contrast, the relative expression level of ALS1 and ALS2 in TS D. sophia is similar. This is the first research that explored different roles of ALS isozymes in resistance to ALS-inhibiting herbicides, which might provide a new perspective for the weed resistance management.

Mile-a-minute (Mikania micrantha Kunth) is a tropical American species and has become a worldwide invasive weed. It was first introduced to mainland China in 1983 in Yingjiang City, Dehong State, Yunnan Province. To assess the origins of populations from Dehong State, Yunnan Province, the genetic structure of 427 individuals from 11 M. micrantha populations from Yunnan, Guangxi, Hainan, and Guangdong provinces were analyzed. A total of 28 alleles were detected in 12 nuclear microsatellite loci. Genetic diversity at the population level was relatively high. An analysis of molecular variance showed that most of the variation occurred within populations (82.73%), and only 18.27% occurred among populations. The genetic differentiation coefficient (F_ST) was 0.183. The estimated gene flow (N_m) from F_ST was 1.116. The independent origins of four populations collected from Dehong State, Yunnan Province, was determined by the unweighted pair-group method with arithmetic means clustering and STRUCTURE analysis. Three gene clusters and one admixture gene cluster were found. A Mantel test of pairwise Nei's genetic distances and pairwise geographic distances revealed no evidence for isolation by distance (r = 0.068, P = 0.343). These results suggest that the post-introduction admixture caused by multiple introductions and high gene flow might contribute to the evolutionary adaptation of M. micrantha. These results could provide a scientific basis for the management of invasive M. micrantha.

Ethiopian mustard (Brassica carinata A. Braun) is a biofuel crop recently introduced in the southeastern United States. For this crop to be successful, integrated weed management strategies that complement its rotation with summer cash crops must be developed. The objectives of this research were to evaluate the effect of previous season summer crops on winter weed emergence patterns during Ethiopian mustard growing season and to assess the impact of planting Ethiopian mustard on the emergence patterns of summer weed species. Gompertz models were fit to winter and summer weed emergence patterns. All models represented more than 80% of the variation, with root mean-square error values less than 0.20. The emergence pattern for winter weed species was best described using growing degree-day accumulation, and this model can be utilized for implementing weed control strategies at the critical Ethiopian mustard growth stages. The results also showed that summer weeds can emerge during the winter in northern Florida but do not survive frost damage, which might create off-season seedbank reductions before the summer crop growing season.

Herbicide resistance is an increasing issue in many weed species, including rigid ryegrass (Lolium rigidum Gaudin); a major weed of winter cropping systems in southern Australia. Recently, this weed has also been found in summer crops in the southeastern region of Australia. Effective control of this herbicide-resistant weed across southeastern Australia requires alternative management strategies. These strategies can be informed by analyses on the interaction of germinable seeds with their regional environments and by identifying the differences between populations of varying herbicide-resistance levels. In this study, we explore how various environmental factors differentially affect the seed germination and seedling emergence of three L. rigidum populations, including one glyphosate-resistant population (GR), one glyphosate-susceptible population (GS), and one population of unknown resistance status (CC04). Germination was greater than 90% for all populations at each temperature regime, except 15/5 C. Populations germinated at a lower rate under 15/5 C, ranging from 74% to 87% germination. Salt stress had a similar effect on the germination of all populations, with 0% germination occurring at 250 mM salt stress. Population GS had greater tolerance to osmotic stress, with 65% germination at –0.4 MPa compared with 47% and 43% germination for CC04 and GR, respectively; however, germination was inhibited at –0.8 and –1.6 MPa for all populations. All populations had lower germination when placed in complete darkness as opposed to alternating light/dark. Germination in darkness was lower for CC04 (69%) than GR (83%) and GS (83%). Seedling emergence declined with increasing burial depth with the lowest emergence occuring at 8 cm (37%) when averaged over the populations. These results indicate that L. rigidum can survive under a range of environmental variables and that the extent of survival differs based on population; however, there was no difference based on herbicide-resistance status.

African mustard (Brassica tournefortii Gouan) is a problematic winter annual weed in Australia. Germination ecology of B. tournefortii may change in response to the maternal environments or habitats in which the plants grow. A study was conducted to evaluate the effect of environmental factors on germination and emergence of four populations of B. tournefortii that were collected from different fields. Averaged over populations, germination was stimulated by dark and was higher at 25/15 C (92%) compared with 15/5 C (76%) and 35/25 C (45%). Averaged over light/dark regimes, at the lowest temperature regime (15/5 C), population A had higher germination than population D; however, at the highest temperature regime (35/ 25 C), population D had higher germination than population A. Populations B and C had higher germination in the temperature range of 25/15 C and 30/20 C compared with 15/5 C, 20/10 C, and 35/25 C. Seeds germinated at a wide range of alternating day/night temperatures (15/5 to 35/25 C), suggesting that seeds can germinate throughout the year if other optimum conditions are available. Population A was more tolerant to water and salt stress than population D. The sodium chloride concentration and osmotic potential required to inhibit 50% germination of population A were 68 mM and –0.60 MPa, respectively. Averaged over populations, seeds placed at 1-cm soil depth had the highest emergence (54%), and burial depth of 8 cm resulted in 28% seedling emergence. Averaged over populations, wheat residue retention at 6,000 kg ha^–1 resulted in greater seedling emergence than the residue amount of 1,000 kg ha^–1. The results suggest that B. tournefortii will be favored in no-till systems and that the seedbank of B. tournefortii could be managed by tillage regimes that bury its seeds below 8-cm depths and restrict seedling emergence and growth of new plants.

African lovegrass [Eragrostis curvula (Schrad.) Nees] is an invasive weed that is threatening biodiversity around the world and will continue to do so unless its efficient management is achieved. Consequently, laboratory and field-based experiments were performed to analyze several measures of germination to determine the effect of drought stress, radiant heat stress, and burial depth and duration (longevity) on E. curvula seeds. This study investigated seeds from four spatially varied populations across Australia: Maffra and Shepparton, VIC; Tenterfield, NSW; and Midvale, WA. Results showed that increasing drought stress reduced and slowed germination for all populations. Maffra (24% vs. 83%) and Shepparton (41% vs. 74%) were reduced at the osmotic potential of ≤–0.4 MPa, while Tenterfield (35% vs. 98.6%) and Midvale (32% vs. 91%) were reduced at ≤–0.6 MPa, compared with the mean of all other osmotic potentials. Radiant heat at 100 C significantly reduced and slowed germination compared with 40 C for Tenterfield (62% vs. 100%), Shepparton (15% vs. 89%), and Midvale (41% vs. 100%), while Maffra (75% vs. 86%) had consistent germination. For the effect of burial depth and duration (longevity), there was no significant difference across the 14-mo period; however, the 0-cm burial depth had a significantly lower final germination percentage compared with depths of 3, 5, and 10 cm (24% vs. 55%). Although each trial was conducted independently, the results can be used to help identify efficient control measures to reduce infesting populations. Recommended measures include using soil moisture monitoring to detect which conditions will promote germination, as germination is encouraged when the osmotic potential is >–0.6 MPa; exposing seeds to radiant heat (>100 C) using methods such as prescribed burning; and limiting soil disturbance over time to reduce seed establishment.

Field studies were conducted in 2019 and 2020 to compare the effects of shade cloth light interception and Palmer amaranth (Amaranthus palmeri S. Watson) competition on ‘Covington’ sweetpotato [Ipomoea batatas (L.) Lam.]. Treatments consisted of a seven by two factorial arrangement, in which the first factor included shade cloth with an average measured light interception of 41%, 59%, 76%, and 94% and A. palmeri thinned to 0.6 or 3.1 plants m^–2 or a nontreated weed-free check; and the second factor included shade cloth or A. palmeri removal timing at 6 or 10 wk after planting (WAP). Amaranthus palmeri light interception peaked around 710 to 840 growing degree days (base 10 C) (6 to 7 WAP) with a maximum light interception of 67% and 84% for the 0.6 and 3.1 plants m^–2 densities, respectively. Increasing shade cloth light interception by 1% linearly increased yield loss by 1% for No. 1, jumbo, and total yield. Yield loss increased by 36%, 23%, and 35% as shade cloth removal was delayed from 6 to 10 WAP for No. 1, jumbo, and total yield, respectively. F-tests comparing reduced versus full models of yield loss provided no evidence that the presence of yield loss from A. palmeri light interception caused yield loss different than that explained by the shade cloth at similar light-interception levels. Results indicate that shade cloth structures could be used to simulate Covington sweetpotato yield loss from A. palmeri competition, and light interception could be used as a predictor for expected yield loss from A. palmeri competition.

Prevalence of wild oat (Avena fatua L.) and sterile oat [Avena sterilis ssp. ludoviciana (Durieu) Gillet & Magne; referred to as A. sterilis hereafter], winter-season weeds, is increasing in the eastern grain region of Australia. Biological attributes of these weeds enable them to survive in a wide range of environments and under different weed infestation levels. The interference of A. fatua and A. sterilis in a wheat (Triticum aestivum L.) crop was examined in southeast Queensland, Australia, through field studies in 2019 and 2020. Different infestation levels (0, 3, 6, 12, 24, and 48 plants m^–2) of A. fatua and A. sterilis were evaluated for their potential to cause yield losses in wheat. Based on a three-parameter logarithmic model, the A. fatua and A. sterilis infestation levels corresponding to 50% wheat yield loss were 15 and 16 plants m^–2, respectively. The yield reduction was due to a reduced spike number per unit area because of an increased weed infestation level. At the highest weed infestation level (48 plants m^–2), A. fatua and A. sterilis produced a maximum of 4,800 and 3,970 seeds m^–2, respectively. Avena fatua exhibited lower seed retention (17% to 39%) than A. sterilis (64% to 80%) at wheat harvest, as most of the seeds of A. fatua had shattered at crop maturity. Our results implied that there is a good opportunity for harvest weed seed control if the paddock is infested with A. sterilis. This study suggests that in the absence of an integrated weed management strategy (using both chemical and nonchemical options), a high infestation of these weeds could cause a severe crop yield loss, increase weed seed production, and replenish the weed seedbank in the soil.

The complementary activity of 4-hydroxphenylpyruvate dioxygenase (HPPD) inhibitors and atrazine is well documented, but the use of atrazine is restricted in some geographic areas, including the province of Quebec in Canada, necessitating the evaluation of atrazine alternatives and their interactions with HPPD inhibitors. The objectives of this study were to determine whether mixing HPPD inhibitors with atrazine alternative photosystem II (PS II) inhibitors, such as metribuzin and linuron applied PRE or bromoxynil and bentazon applied POST, results in similar control of multiple herbicide–resistant (MHR) waterhemp [Amaranthus tuberculatus (Moq.) Sauer] in corn (Zea mays L.). Ten field trials, five with herbicides applied PRE and five with herbicides applied POST, were conducted in Ontario, Canada, in fields infested with MHR A. tuberculatus. Isoxaflutole, applied PRE, controlled MHR A. tuberculatus 58% to 76%; control increased 17% to 34% with the addition of atrazine, metribuzin, or linuron at three of five sites across 2, 4, 8, and 12 wk after application (WAA). The interaction between isoxaflutole and PS II inhibitors, applied PRE, was additive for MHR A. tuberculatus control and biomass and density reduction. Mesotrione, tolpyralate, and topramezone, applied POST, controlled MHR A. tuberculatus 54% to 59%, 61%, and 44% to 45%, respectively, at two of five sites across 4, 8, and 12 WAA. The addition of atrazine, bromoxynil, or bentazon to mesotrione improved MHR A. tuberculatus control 29%, 34%, and 22%; to tolpyralate, improved control 2%, 20%, and 10%; and to topramezone, improved control 3%, 14%, and 8%, respectively. Interactions between HPPD and PS II inhibitors were mostly additive; however, synergistic responses were observed with mesotrione + bromoxynil or bentazon, and tolpyralate + bromoxynil. Mixing atrazine alternatives metribuzin or linuron with isoxaflutole, applied PRE, and bromoxynil or bentazon with mesotrione or tolpyralate, applied POST, resulted in similar or better control of MHR A. tuberculatus in corn.